Sensitivity Information and Courses from MediaLab, Inc.
These are the MediaLab courses that cover Sensitivity and links to relevant pages within the course.
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| Basis of the Urine pH Test Dipsticks measure pH using methyl red and bromthymol blue indicator dyes. The color change that occurs in this test area correlates with the urine's pH. Sensitivity to pH ranges from 5.0 (acid pH) to 9.0 (alkaline pH) on a urine reagent strip. | View Page |
| False Negative Results False negative results occur when elements present in the urine interfere with either the enzymatic reaction or prevent the oxidation of potassium iodide. Examples of such substances include: large quantities of ketones aspirin ascorbic acid > 50 mg/dL with some reagent strips levadopa 5-hydroxyindoleacetic acid homogentisic acid sodium fluoride ( a preservative)A specific gravity higher than 1.020 may lower glucose reagent sensitivity, especially in the presence of a high urine pH. Exposing reagent strips to excess humidity may also reduce glucose reagent reactivity.Check the package insert of the reagent strips used in your laboratory for interfering substances that may affect glucose results. | View Page |
| False Negative Results False negative results may occur with some methods when the concentration of ascorbic acid is greater than 5 mg/dL. The sensitivity of the blood portion of the test strip is decreased in specimens with a high specific gravity and increased protein. High levels of nitrites may delay the reaction, causing a false negative to be reported. If the pH of a urine sample is below 5, hemolysis of red cells as part of the test reaction is inhibited which results in a false negative reaction. An improperly mixed specimen may test negative if the red blood cells are in the sediment. | View Page |
| Test Sensitivity This test is sensitive to 0.06-0.1 mg/dL nitrite ion in urines with a low specific gravity and ascorbic acid concentrations of less than 25 mg/dL. Pink spots or pink edges should not be interpreted as a positive result because some medications can color urine red or turn red in an acid environment. Any degree of uniform pink color should be considered positive, suggesting the presence of 105 organisms/mL. Detection of low levels of nitrite ion may be enhanced by comparing the activated test strip to a white background. It is important to note that color development is NOT proportional to the number of bacteria present. The test is specific for nitrites and does not react with any other substances normally present in urine. Negative results do not necessarily rule out a urinary tract infection because yeasts or gram-positive bacteria unable to reduce nitrites may be the causative agent. | View Page |
| Semi-automated and automated reagent strip readers: | View Page |
| Which of the following best defines "sensitivity": | View Page |
| If a test is said to have a sensitivity of 95%, it will : | View Page |
| When evaluating the throughput of a particular method you should consider all of the following except: | View Page |
| How close the assayed value of an analyte is to its actual value is a reflection of: | View Page |
| Analytical sensitivity of a method generally refers to: | View Page |
| The term analytical specificity refers to: | View Page |
| Group A beta-hemolytic streptococci are best characterized by which of the following: | View Page |
| The disk diffusion method of measuring antimicrobial sensitivity is also termed: | View Page |
| Which of the following streptococcus exhibits a positive bile solubility test: | View Page |
| Which two of the following tests are helpful for documenting previous Streptococcal throat and skin infections: | View Page |
| The McFarland Comparison Card shown in the illustration is used to: | View Page |
| Reporting Ictotest® Results Since detectable amounts of bilirubin are not normally present in urine, results of the Ictotest® are reported as “positive” or “negative”, there is no quantitation. The sensitivity of Ictotest® is better than dipstick methods or the Harrison test. Ictotest® will detect as little as 0.05-0.10 mg bilirubin/dl urine, making it the procedure of choice for confirming bilirubin in urine specimens. | View Page |
| Laboratory Tests of Hemostatic Function – Prothrombin Time The INR component of the laboratory result is a calculated value that is used by the clinician to monitor anticoagulant therapy and adjust dosage as dictated by clinical status. An INR of 2.0 - 3.0 is often desired as the therapeutic range. The following formula is used by the clinical laboratory to derive an INR value. The INR must be adjusted for every new lot of PT reagent. INR= (PT of patient/PT of geometric mean of the normal population)ISI The International Sensitivity Index, or ISI value, is provided by the reagent manufacturer as the relative sensitivity of the reagent itself. The INR is used to standardize PT results, and in turn, anticoagulant therapy, across laboratory instrumentation, methodologies, and locale. Be sure to frequently check that ISI values match those of the lot currently in use as erroneous results may otherwise occur . | View Page |
| Fibrin/Fibrinogen Degradation Products and D-dimers The presence of D-dimers in plasma or whole blood indicates that fibrin has been formed and degraded (fibrinolysis). Plasmin can also degrade intact fibrinogen, generating fibrinogen degradation products that are detected in fibrin/fibrinogen degradation products (FDP) assays. D-dimers and FDP can become elevated whenever the coagulation and fibrinolytic systems are activated. The presence of D-dimer confirms that both thrombin and plasmin have been generated since it can only be produced as the result of the plasmin degradation of fibrin. This makes the test for D-dimers more specific for fibrinolysis than the FDP test that also detects the products of the direct proteolysis of fibrinogen (fibrinogenolysis).The D-dimer test can be useful in the diagnosis of deep venous thrombosis (DVT) or pulmonary embolism (PE), two forms of venous thromboembolism (VTE). When the test is being used for this purpose, it is important that D-dimer levels are accurately measured and accurately reported because of the serious nature of this clinical decision. If the test is positive in a patient suspected to have DVT or PE, clinicians proceed with further diagnostic tests. If the test is negative, depending on the clinical situation and the sensitivity of the D-dimer assay, DVT or PE is considered unlikely and further diagnostic tests for DVT or PE might not be pursued. D-dimer is a sensitive, but not specific, diagnostic test for disseminated intravascular coagulation, and an indicator of increased risk of future myocardial infarction in patients evaluated for chest pain. | View Page |
| Why Choose a Molecular Method? A molecular method may be the test method of choice for a variety of reasons, including the following: Organisms of interest, especially in microbiology or virology, may be extremely slow growing, fastidious or extremely limited in quantity. Other technologies lack the necessary sensitivity or specificity Patient population requirements | View Page |
| Advantages of Molecular Testing Molecular methodologies offer numerous advantages to the clinical laboratory. These include:Sensitivity: Amplification methodologies are particularly useful in increasing the sensitivity of a methodology and useful in the identification of target molecules of interest that are only present in low concentrations. Specificity: Molecular methods minimize false positive test results by targeting the specific molecule of interest.Turn Around Time: In comparison with standard traditional culture methods, molecular methodologies usually offer better turn around times from receipt to result reporting.Application: broader application can be found with molecular methodologies such as infectious diseases, genetic testing, forensics, drug resistance, and tumor marker detection and monitoring. | View Page |
| Which of the following are considered advantages of molecular testing? | View Page |
| Amplification Issues The product of an amplification reaction is termed an amplicon. Amplicons are the outcome of what is to be detected. Due to the sensitivity of amplification methodologies, and the nature of the amplicon, just a small amount of contamination can cause false positive results.Quality control of these various steps in the analytical procedure assure minimal contamination and quality results. | View Page |
| Case Study: De-identified Health Information. You work in a laboratory microbiology department which provides a local nursing home with information about the effectiveness of various antibiotics it uses to treat infections. You print the requested information, including complete patient identification, bacterial organisms identified, and their sensitivity to various antibiotics. What information should you provide to the nursing home? | View Page |
| Warfarin cont. The genes involved in warfarin metabolism are CYP2C9 and vitamin K epoxide reductase complex subunit 1 (VKOR). Warfarin owes its anticoagulant action to its inhibition of VKOR. This enzyme recycles vitamin K, a critical element for the clotting factors II, VII, IX, and X, as well as for proteins C, S, and Z. There are six CYP2C9 alleles that are known to cause prolonged metabolism of warfarin: CYP2C9 *2, *3, *4, *5, *6, and *11. (Polymorphisms in CYP450 genes are denoted with asterisks.)One-third of the patients that receive warfarin metabolize it differently than expected and experience a higher risk of bleeding.Genetic testing for the two most common polymorphisms (CYP2C9*2 and *3) as well as for VKOR may be able to reduce the variability associated with warfarin dosing response. Labs performing PGx testing can provide general warfarin dosing recommendations based on the patient's genotype analysis. The lab report will indicate whether a patient has a normal, mild, moderate, high, or very high sensitivity to warfarin. For example, a patient who has one CYP2C9 normal wild-type allele (CYP2C9 *1), one polymorphism (CYP2C9*3), and also a VKOR polymorphism is predicted to have a moderate sensitivity to warfarin. This patient should have frequent INR monitoring and possible warfarin dose reduction. It is important to recognize that knowing a genotype does not necessarily guarantee accurate dose prediction; other drugs and/or environmental or disease factors can also alter CYP2C9 activity. Therefore, monitoring the INR is still very important. | View Page |
| References Clinical Chemistry: Theory, Analysis, Correlation, 4th Edition. Lawrence A. Kaplan, Amadeo Pesce, Steven Kazmierczak. New York: Mosby, 2002.FDA Clears Genetic Lab Test for Warfarin Sensitivity. FDA News. U.S. Food and Drug Administration. Available at http://www.fda.gov/bbs/topics/NEWS/2007/NEW01701.html. Accessed June 3, 2008.Goodman & Gilman's The Pharmacological Basis of Therapeutics, 11th Edition. Laurence Brunton, John Lazo, Keith Parker. McGraw-Hill, 2005.Tanaka E, Terada M, Misawa S. Cytochrome P450 2E1: it's clinical and toxicological role. J Clin Pharm Ther. 2000 Jun;25(3):165-75.The Chemistry of Mind-Altering Drugs: History, Pharmacology, and Cultural Context. Daniel Perrine, American Chemical Society Publication, 1996.Tietz Textbook of Clinical Chemistry and Molecular Diagnostics, 4th Edition. Carl A. Burtis and Edward R. Ashwood, eds. Philadelphia: WB Saunders, 2005. | View Page |
| Calculating Sensitivity Sensitivity is the ability of a test to correctly identify individuals who do have a particular disease or disorder.
To determine sensitivity, we use the following equation:
True Positives (TP)
Divided by True Positives (TP) plus False Negatives (FN)
Times 100
or
(TP ÷ (TP + FN)) x 100
The result will be a percentage. | View Page |
| Sensitivity Example: Calculations (1) Let's return to our experiment method from the previous example. This time, we'll calculate the sensitivity.The experimental method produced 600 true positives and 25 false negatives. By inserting these numbers into the sensitivity equation, we get (600 + (600 + 25)) x 100.Thus, the experimental method has a sensitivity of 96%. | View Page |
| Sensitivity Example: Calculations (2) The tried-and-true method also had 600 true positives but had 50 false negatives. Once again inserting these numbers into our equation, (600 ÷ (600 + 50)) x 100, we find that the tried-and-true method has a sensitivity of 92%. | View Page |
| Specificity vs. Sensitivity To review, specificity is “disease focused”. The more specific a test is, the fewer false positive results will occur. Remember that a false positive result can possibly lead to a misdiagnosis with the possible consequence of unnecessary diagnostic procedures and therapies. Sensitivity, on the other hand, is “wellness or normal focused”. The more sensitive a test is, the fewer false negative results it produces. | View Page |
| Sensitivity Example: Comparison The sensitivity of our experimental method is 96% and our tried-and-true method is 92%. Sensitivity, reflects the ability of a test to categorize those individuals with the condition as positive. A highly sensitive test will be positive in most individuals having the condition. Conversely, those individuals who test negatively with a highly sensitive test are unlikely to have the condition. | View Page |
| Using the data and formula to the right, we can calculate sensitivity of the West Nile Virus test to be: | View Page |
| Based on the test results to the right, what is the sensitivity of this test? | View Page |
| What is the value of a Direct Smear? A direct smear is made from a clinical specimen, not a culture. It can be used to:Guide the physician on initial choice of antibiotic, pending results of culture and sensitivity.Judge specimen quality.Contribute to selection of culture media, especially with mixed flora.Provide internal quality control when direct smear results are compared to culture results. | View Page |
| pH The pH of normal fresh semen is 7.0 or greater. Acid conditions can lead to reduced sperm motility and viability.Secretions of the different glands of the male reproductive tract contain fluids of different pH. The portion of semen that originates in the seminal vesicles is basic, that of the prostate gland is acidic. If the pH is low it could mean that there is an obstruction in the ejaculatory duct below the level of the seminal vesicles or it could signal absence of the vas deferens. Low pH is often associated with low volume since both basic pH and much of semen volume are products of the seminal vesicles. Measuring pH can thus help a clinician determine the cause of azoospermia (absence of sperm in semen).The pH is measured using pH testing strips. A drop of semen is placed on a pH strip and allowed to develop full color. Final color is compared to a standard. For the most accurate results, use test strips with a sensitivity in the basic range, for example from 6.0 to 10.0. | View Page |
| A peripheral blood smear with many myeloid cells (photograph) was presented for morphology review. Toxic vacuoles in the neutrophil and monocyte most likely represent: | View Page |