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Biopsy Information and Courses from MediaLab, Inc.

These are the MediaLab courses that cover Biopsy and links to relevant pages within the course.

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CLIA Hematology / Hemostasis Review
What is the site used most frequently in the adult patient when performing a bone marrow biopsy:View Page
What is the normal cellularity of an iliac crest bone marrow biopsy in a 50 year old male:View Page

CLIA Microbiology / Serology Review
Which of the following statements about Rickettsia is false:View Page

Current Topics in Clinical Microbiology
Clinical History

The prototype history for this organism is either a still birth or a neonate with death ensuing within 2 or 3 days post-partem due to high fever, sepsis, and respiratory distress. The mother usually experienced a flu-like illness late in the third trimester of pregnancy, characterized by low-grade fever, myalgias, malaise and backache. In this case, biopsy material of brain tissue obtained at autopsy was submitted to the pathology laboratory for tissue diagnosis and fluid from the pia-arachnoid was sent to the microbiology laboratory for culture.

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A Brown and Brenn gram stain was performed on one of the tissue biopsy specimens. Organisms were seen as shown in the photograph. Based on the history and the appearance of the bacteria, the most likely identification is:View Page
Histology of Brain Biopsy

The H & E section of the brain biopsy (left frame)revealed edema of the parencymya with the accumulation of inflammatory cells in the perivascular spaces. The close in view of the exudate (right) frame reveals that the inflammatory exudate is comprised primarily of polymorphonuclear luekocytes. The histologic diagnosis therefore is suppurative meningitis, with culture results necessary to establish the etiologic agent.

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Introduction to Bone Marrow
Preparations which can be made from the bone marrow aspiration specimen include:View Page
Which of the following statements are FALSE regarding the bone marrow BIOPSY specimen?View Page
A biopsy containing 80% fat and 20% cells would be considered:View Page
Collection of the Aspirate

The marrow aspiration is usually performed before a biopsy is done. A syringe is attached to the needle, the plunger is pulled and 1.0-1.5 ml. of marrow particles and blood from marrow sinuses is withdrawn. If additional bone marrow samples are needed, a separate syringe must be used each time. If more than 2 cc. per syringe is taken out, the blood to marrow ratio will be too high and the preparations will not accurately reflect the marrow contents. As the marrow is aspirated into the syringe the patient will feel some pain and pressure even though local anesthetic has been administered.

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Fixation and Processing of the Biopsy Specimen

The biopsy specimen is usually fixed in Zenkers’ acetic solution (5% glacial acetic acid; 95% Zenkers) for 6-18 hours or B-5 fixative for one to two hours. Excessive time in either fixative makes the tissue brittle, then briefly decalcified. The tissue is processed together with other tissues, and is embedded in paraffin and cut at 4 µm and stained with hematoxylin and eosin (H&E) and Perls’ Prussian blue iron stain, and other special stains as indicated.

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Advantages of a Biopsy Specimen

Examining the biopsy allows the structure of the marrow to be viewed as it exists in the body. It provides essential diagnostic information in conditions that disrupt the normal architecture, such as metastatic carcinoma, myelofibrosis, Hodgkin's lymphoma and granuloma. A biopsy may also be used to evaluate cellularity and identify acid-fast bacteria or fungi in less time than is needed for routine culture methods. One disadvantage of the tissue sections prepared from the biopsy sample is that morphologic detail is lost. For this reason, in many cases imprint slides or smears from the aspirated sample are also examined.

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The most common site for bone marrow biopsy and aspiration in adults is:View Page
Match the phrase with its description.View Page
Which of the following statements are TRUE regarding biopsy specimens? (Choose ALL of the correct answers)View Page
Preparation of Direct Smears

The sample in the first syringe is quickly delivered into a watchglass or onto a slide. After the technologist verifies the presence of white-gray marrow particles in the sample, push smears and/or coverslip smears from this unanticoagulated sample are made immediately. All films should be rapidly air dried. The appearance of fat as irregular holes in the films also give the assurance that marrow and not just blood has been obtained. This type of smear is referred to as a direct smear and is usually used to evaluate morphology. Although some evaluation of cellularity and M:E ratio is possible, particle smears or biopsy sections provide a more accurate representation of these factors.

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Collection of Bone Marrow Biopsy

A bone marrow biopsy involves removing a small portion of the bone marrow without destroying the architecture of the marrow. This type of biopsy is necessary when the marrow cannot be aspirated (dry tap) due to a disease process, and also provides additional information complementary to that derived from the aspirate: biopsy specimens are more accurate for assessing cellularity, and infiltrative processes, such as metastatic carcinoma, fibrosis, amyloid, and lymphoma. A biopsy specimen is processed as follows: touch preparation tissue section

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Biopsy Touch Preparation

A touch prep is made by holding the biopsy plug with a forceps and touching the plug to one or more clean slides in several places. Imprints of the marrow remain on the slide. The slides are quickly air dried, fixed with methanol and stained with Wright-Giemsa or other cytochemical stains. Morphologic details of the cells are preserved with this type of preparation.

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Low Power View of Prussian Blue Stained Biopsy

This low power view is from a biopsy of a patient with normal iron stores. Note the presence of iron shown by the arrow.

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Another Biopsy Showing Normal Iron Stores

Another view of a biopsy showing normal amounts of iron.

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Increase Marrow Iron Stores

Markely increased stainable iron is present in this biopsy. Iron stores may be increased in sideroblastic anemia, chronic infections, hemochromatosis, hemosiderosis due to numerous blood transfusions, chronic hepatitis, cirrhosis, and uremia.

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Biopsy Section and Bone Marrow Smear

The biopsy section and bone marrow smear can both be used for evaluating iron stores. If the biopsy section is used, the fixative chosen for processing the specimen should not contain acid. Acid fixative can remove iron from the tissue, producing the false impression of iron deficiency.

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Microscopic Evaluation of Marrow Smears

The microscopic examination of marrow smears can be divided into three main steps.Evaluating cellularity from the biopsy/particle smearEvaluating marrow iron from the biopsy/particle smearMorphology examination from the Romanwsky stained smears

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Medium Power View of Biopsy

This biopsy also has a cellularity of 25% and approximately 75% fat, and is therefore slightly hypocellular.

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The peripheral blood platelet count in this patient will likely be:View Page
Evaluating Cellularity

The biopsy section or particle smears are the preparations that are preferred for the evaluation of marrow cellularity and architecture. The low power objective is used to examine the slide and compare the cellular area to the amount of fat (fat cells appear as white circles interspersed among the cellular elements). On the biopsy section the specific type of cells present are difficult to determine but the cellularity can be clearly seen. The particle smear may be used to evaluate cellularity as well as morphology. The diagnostic significance of the evaluation of cellularity, is simply to see if there are too few, too many, or sufficient cell precursors present in the bone marrow.

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Hypocellular Bone Marrow Biopsy

This biopsy section was taken from a patient who has very few cellular elements in the marrow. Notice that over 90% of the marrow is composed of fat. If all of the cellular elements are decreased, the patient's condition is said to be pancytopenic or aplastic. There are numerous causes for aplasia, including drugs such as chloramphenicol, chemotherapy and inheritance (Fanconi's Anemia).

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Low Power View of Biopsy

This low power view of a hematoxyln and eosin stained bone marrow biopsy shows fat cells as clear circles, and the darker intervening areas as blood cell precursors. This biopsy is about 25% cellular, or mildly hypocellular. A normal marrow in a middle aged adult is about 50% cellular.

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Hypercellular Bone Marrow Biopsy

This is another view of the same slide showing increased cellularity and decreased fat.

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Hypercellular Bone Marrow Biopsy

A low power view of a biopsy section stained with hematoxylin eosin stain. This section is showing increased cellularity and decreased fat. This specimen is about 85% cellular.

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Medicare Compliance for Clinical Laboratories
Case Study 7

The setting is the cafeteria in a hospital or the lounge in an independent laboratory. Two employees from different departments are old friends are having lunch together. A billing clerk and a medical technologist are friends and are having lunch together. The billing clerk mentions that she saw a bill go through the system for one of her coworkers for a biopsy. She asks the medical technologist if she has the necessary security level access to see pathology test results because she is concerned about the welfare of the coworker. The medical technologist does have the necessary security clearance to see the results. She should:Correct Answer: Refuse to look up the results for the clerk and remind the clerk that it is a violation of compliance policies to do so, or to ask another to do so. Remind her of the requirement for each employee to report any violations of policy. Discussion: The Medical technologist has a responsibility to report violations of compliance policies and the friend has put her in a difficult position. For that reason, it is not enough to just refuse the clerk's request. If the medical technologist does not take the responsibility to inform the employee of the policy then there is a possibility that the employee would ask some other employee to do it for her.

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Mycology: Yeasts and Dimorphic Pathogens
The colonies shown in the upper image, obtained from a biopsy of an ulcerating skin lesion of the arm, are growing on agar slants of Sabouraud's dextrose agar. The lower image is a photomicrograph of a lactophenol blue mount made from a portion of the colony growing in the left slant. The diagnosis is:View Page
Shown in this photomicrograph is a Gomori methenamine silver stain of a lung biopsy obtained from a patient with X-ray evidence of multi-focal pneumonitis. The yeast most likely to be recovered in culture of this tissue is:View Page


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